Search for: All records

For nearly two decades, stream baiting of northern and central California coastal streams has been an important tool in the management of sudden oak death, a devastating forest disease caused by the oomycete Phytophthora ramorum. Phytophthora species are baited with floating rhododendron leaves, serving as an early detection tool for the presence of P. ramorum in watersheds across more than 800 km of California coastline. While this long-standing management tool is focused on a single species of Phytophthora, other species of Phytophthora have been baited alongside P. ramorum, and this study documents the presence and distribution of 22 Phytophthora and Nothophytophthora species across the northern and central coasts of California. Although P. ramorum was isolated at the greatest number of sites, several species in subgeneric clade 6 were also abundant and widespread, a common feature of Phytophthora stream baiting studies. Clade 3 species P. nemorosa, P. pluvialis, and P. pseudosyringae were also frequently isolated in northern coastal streams. The species Nothophytophthora caduca and the genus Nothophytophthora are reported for the first time in North America along with the first report of P. pluvialis in California. Two novel species, Nothophytophthora sp. californica and P. sp. aureomontensis (a member of the P. citricola species complex) are provisionally named. Mitochondrial sequences revealed multiple hybridization events between P. lacustris and P. riparia. Stream monitoring can serve as an important tool for monitoring ongoing Phytophthora invasions as well as establishing baseline pathogen communities, critical data for preventing future invasions. 

Many coastal forests stretching from central California to southwest Oregon are threatened or have been impacted by the invasive forest pathogen Phytophthora ramorum, cause of sudden oak death. We analyzed a set of stand-level forest treatments aimed at preventing or mitigating disease impacts on stand composition, biomass, and fuels, using a before-after-control-intervention experiment with a revaluation after five years. We compared the effects of restorative management in invaded stands to preventative treatments in uninvaded forests. The restorative treatments contrasted two approaches to mastication, hand-crew thinning, and thinning with pile burning with untreated controls (N=30) while the preventative treatments were limited to hand-crew thinning (N=10). Half of the restoration treatments had basal sprouts removed two- and four-years after treatment. All treatments significantly reduced stand density and increased average tree size without significantly decreasing total basal area both immediately and five years after treatments. Preventative treatments also significantly increased dominance of timber species not susceptible to P. ramorum. Follow-up basal sprout removal in the restoration experiment appears to maintain treatment benefits to average tree size and may be associated with small decreases in stand density five years after initial treatment. Our study demonstrates that for at least five years, a range of common stand management practices can improve forests threatened or impacted by sudden oak death. 

A collection of 30 Phytophthora cactorum and 12 P. pseudotsugae (subclade 1a) strains isolated from several recent surveys across California was phylogenetically compared to a worldwide collection of 112 conspecific strains using sequences from three barcoding loci. The surveys baited P. cactorum from soil and water across a wide variety of forested ecosystems with a geographic range of more than 1000 km. Two cosmopolitan lineages were identified within the widespread P. cactorum, one being mainly associated with strawberry production and the other more closely associated with apple orchards, oaks and ornamental trees. Two other well-sampled P. cactorum lineages, including one that dominated Californian restoration outplantings, were only found in the western United States, while a third was only found in Japan. Coastal California forest isolates of both Phytophthora species exhibited considerable diversity, suggesting both may be indigenous to the state. Many isolates with sequence accessions deposited as P. cactorum were determined to be P. hedraiandra and P. ×serendipita, with one hybrid lineage appearing relatively common across Europe and Asia. This study contains the first report of P. pseudotsugae from the state of California and one of the only reports of that species since its original description. 

Sudden oak death (SOD), caused by the generalist pathogen Phytophthora ramorum, has profoundly impacted California coastal ecosystems. SOD has largely been treated as a two-host system, with Umbellularia californica as the most transmissive host, Notholithocarpus densiflorus less so, and remaining species as epidemiologically unimportant. However, this understanding of transmission potential primarily stems from observational field studies rather than direct measurements on the diverse assemblage of plant species. Here, we formally quantify the sporulation potential of common plant species inhabiting SOD-endemic ecosystems on the California coast in the Big Sur region. This study allows us to better understand the pathogen’s basic biology, trajectory of SOD in a changing environment, and how the entire host community contributes to disease risk. Leaves were inoculated in a controlled laboratory environment and assessed for production of sporangia and chlamydospores, the infectious and resistant propagules, respectively. P. ramorum was capable of infecting every species in our study and almost all species produced spores to some extent. Sporangia production was greatest in N. densiflorus and U. californica and the difference was insignificant. Even though other species produced much less, quantities were nonzero. Thus, additional species may play a previously unrecognized role in local transmission. Chlamydospore production was highest in Acer macrophyllum and Ceanothus oliganthus, raising questions about the role they play in pathogen persistence. Lesion size did not consistently correlate with the production of either sporangia or chlamydospores. Overall, we achieved an empirical foundation to better understand how community composition affects transmission of P. ramorum. 

Anthropogenic activities have altered historical disturbance regimes, and understanding the mechanisms by which these shifting perturbations interact is essential to predicting where they may erode ecosystem resilience. Emerging infectious plant diseases, caused by human translocation of nonnative pathogens, can generate ecologically damaging forms of novel biotic disturbance. Further, abiotic disturbances, such as wildfire, may influence the severity and extent of disease‐related perturbations via their effects on the occurrence of hosts, pathogens and microclimates; however, these interactions have rarely been examined.

The disease ‘sudden oak death’ (SOD), associated with the introduced pathogenPhytophthora ramorum, causes acute, landscape‐scale tree mortality in California's fire‐prone coastal forests. Here, we examined interactions between wildfire and the biotic disturbance impacts of this emerging infectious disease. Leveraging long‐term datasets that describe wildfire occurrence andP. ramorumdynamics across the Big Sur region, we modelled the influence of recent and historical fires on epidemiological parameters, including pathogen presence, infestation intensity, reinvasion, and host mortality.

Past wildfire altered disease dynamics and reduced SOD‐related mortality, indicating a negative interaction between these abiotic and biotic disturbances. Frequently burned forests were less likely to be invaded byP. ramorum, had lower incidence of host infection, and exhibited decreased disease‐related biotic disturbance, which was associated with reduced occurrence and density of epidemiologically significant hosts. Following a recent wildfire, survival of mature bay laurel, a key sporulating host, was the primary driver ofP. ramoruminfestation and reinvasion, but younger, rapidly regenerating host vegetation capable of sporulation did not measurably influence disease dynamics. Notably, the effect ofP. ramoruminfection on host mortality was reduced in recently burned areas, indicating that the loss of tall, mature host canopies may temporarily dampen pathogen transmission and ‘release’ susceptible species from significant inoculum pressure.

Synthesis. Cumulatively, our findings indicate that fire history has contributed to heterogeneous patterns of biotic disturbance and disease‐related decline across this landscape, via changes to the both the occurrence of available hosts and the demography of epidemiologically important host populations. These results highlight that human‐altered abiotic disturbances may play a foundational role in structuring infectious disease dynamics, contributing to future outbreak emergence and driving biotic disturbance regimes.

 

Human‐altered disturbance regimes and changing climatic conditions can reduce seed availability and suitable microsites, limiting seedling regeneration in recovering forest systems. Thus, resprouting plants, which can persist in situ, are expected to expand in dominance in many disturbance‐prone forests. However, resprouters may also be challenged by changing regimes, and the mechanisms determining facultative seedling recruitment by resprouting species, which will determine both the future spread and current persistence of these populations, are poorly understood. In the resprouter‐dominated forests of coastal California, interactions between wildfire and an emerging disease, sudden oak death (SOD), alter disturbance severity and tree mortality, which may shift forest regeneration trajectories. We examine this set of compound disturbances to (1) assess the influence of seed limitation, biotic competition, and abiotic conditions on seedling regeneration in resprouting populations; (2) investigate whether disease‐fire interactions alter postfire seedling regeneration, which have implications for future disease dynamics and shifts in forest composition. Following a wildfire that impacted a preexisting plot network in SOD‐affected forests, we monitored seedling abundances and survival over eight years. With pre‐ and postfire data, we assessed relationships between regeneration dynamics and disturbance severity, biotic, and abiotic variables, using Bayesian generalized linear models and mixed models. Our results indicate that postfire seedling regeneration by resprouting species was shaped by contrasting mechanisms reflecting seed limitation and competitive release. Seedling abundances declined with decreasing postfire survival of mature, conspecific stems, while belowground survival of resprouting genets had no effect. However, where seed sources persisted, seedling abundances and survival generally increased with the prefire severity of disease impacts, suggesting that decreased competition with adults may enhance seedling recruitment in this resprouter‐dominated system. Species’ regeneration responses varied with their relative susceptibility to SOD and suggest compositional shifts, which will determine future disease management and forest restoration actions. These results additionally highlight that mechanisms related to biotic competition, seed limitation, and opportunities for seedling recruitment beneath mature canopies may determine possible shifts in the occurrence of resprouting traits. This result has broad applications to other systems impacted by human‐altered regimes where asexual persistence may be predicted to be a beneficial life history strategy.

 

Forest pathogens are important drivers of tree mortality across the globe, but it is exceptionally challenging to gather and build unbiased quantitative models of their impacts. Here we harness the rare data set matching the spatial scale of pathogen invasion, host, and disease heterogeneity to estimate infection and mortality for the four most susceptible host species ofPhytophthora ramorum, an invasive pathogen that drives the most important biological cause of tree mortality in a broad geographic region of coastal California and southwest Oregon. As of 2012, the most current field survey year, we estimate 17.5 (±4.6, 95% CI [confidence interval]) million tanoak (Notholithocarpus densiflorus) stems were pathogen killed with an additional 71 (±21.5) million infected. We estimated 9.0 million (±2.2) coast live oak (Quercus agrifolia) and 1.7 million (±0.5) California black oak (Quercus kelloggii) stems are disease impacted (mortality and infection combined). Lastly, our estimates suggest infection in 95.2 million (±8.6) California bay laurel (Umbellularia californica), which does not suffer mortality from infection and represents a critical source of continued spread. Prevalent infection as of 2012 suggests the cumulative number of disease‐killed stems likely increased from 20.8 to 42.8 million between 2012 and 2019 for all species. While these impacts are substantial, most host populations occur in a yet to be invaded region of northern California indicating that the disease will intensify in the coming decades.